PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G028500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 219aa    MW: 24435.6 Da    PI: 5.9083
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G028500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.1e-1168114554
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        +  rE+ RRd++N++f+ L ++l +    +  K +K +iL  A++ +++L
  Aqcoe5G028500.1.p  68 KACREKMRRDKLNDRFADLSSILEPG---RPAKTDKTAILGDAIRVLNQL 114
                        678**********************8...89****************999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.51263114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.72E-867119No hitNo description
PfamPF000101.9E-868114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1268130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.3E-1069120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-1270137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDSFQEDSSW NLIDYSRIIE DTSSNDFYWS NQSACMELEV SPADAVLTDK GCTRKRGRNE  60
SCSGPGSKAC REKMRRDKLN DRFADLSSIL EPGRPAKTDK TAILGDAIRV LNQLRAESQE  120
LKVANEKLQE DIKNLKTEKN ELREEKGLLK ADKERIEQQM KAMAIVPGGI VPPHPAAYQA  180
GVNKFMAFPS YGGYPMWQYI PPAALDTSQD HVLRPPVA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262298.11e-127PREDICTED: transcription factor bHLH104-like
SwissprotQ8L4673e-66BH104_ARATH; Transcription factor bHLH104
SwissprotQ9C6822e-66BH115_ARATH; Transcription factor bHLH115
TrEMBLE3WDH31e-136E3WDH3_COPJA; BHLH transcriptional factor
STRINGVIT_14s0081g00720.t012e-96(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51070.11e-67bHLH family protein